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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
17
pCHi-C
11
ATAC-seq
10
snATAC-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
Assay category
21
DNA accessibility
Target of assay
histone
88
histone modification
44
broad histone mark
44
narrow histone mark
Date released
18
February, 2023
17
May, 2021
8
January, 2021
Organism
43
Homo sapiens
Biosample type
22
tissue
16
primary cell
5
cell line
Organ
21
pancreas
blood
8
bodily fluid
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
1968
AMP
232
HPAP
47
KPMP
43
T1D
19
LungMap
4
community
1
ITG
Lab
43
Kyle Gaulton, UCSD
Audit category:
1
inconsistent ontology term
target.investigated_as!
histone
assay_title!
total RNA-seq
organ_slims!
blood
BIOSAMPLE
ASSAY
43 results
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pCHi-C
ATAC-seq
snATAC-seq
CRISPR genome editing followed by DNA sequencing
HiChIP
tissue
islet of Langerhans
11
6
pancreas
4
thymus
1
primary cell
CD4-positive, alpha-beta T cell
2
B cell
1
CD8-positive, alpha-beta T cell
1
activated CD4-positive, alpha-beta T cell
1
adult endothelial progenitor cell
1
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cell line
EndoC_BH1
3
2
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