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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
196
ATAC-seq
174
single cell RNA-seq
130
total RNA-seq
87
RNA microarray
28
snATAC-seq
25
pCHi-C
18
ChIP-seq
16
Hi-C
11
RRBS
10
WGBS
4
MeRIP-seq
3
snDrop-seq
1
DNase-seq
Assay category
18
DNA binding
Target of assay
histone
127
histone modification
66
narrow histone mark
61
broad histone mark
18
control
Date released
17
August, 2017
1
October, 2017
Available data
bam
147
fastq
89
bigWig
71
bed narrowPeak
65
bigBed narrowPeak
52
tagAlign
16
bed bed3+
Organism
18
Homo sapiens
Biosample type
19
in vitro differentiated cells
18
tissue
16
cell line
3
primary cell
Organ
6
pancreas
5
adipose tissue
5
connective tissue
3
liver
3
musculature of body
1
brain
Project
18
AMP
Lab
18
AMP-T2D consortium
target.investigated_as!
histone
files.file_type!
bam
BIOSAMPLE
ASSAY
18 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
6
subcutaneous abdominal adipose tissue
5
liver
3
skeletal muscle tissue
3
brain
1
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