Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
total RNA-seq
16
small RNA-seq
14
ATAC-seq
12
WGBS
6
RRBS
4
Hi-C
3
ChIP-seq
2
FAIRE-seq
Assay category
47
Transcription
18
DNA methylation
16
DNA accessibility
4
3D chromatin structure
3
DNA binding
Target of assay
histone
12
histone modification
10
broad histone mark
3
control
2
narrow histone mark
Date released
667
February, 2021
312
November, 2017
298
August, 2021
192
August, 2017
171
May, 2021
167
May, 2020
163
June, 2019
120
July, 2018
117
February, 2023
105
October, 2019
87
November, 2018
77
July, 2019
66
May, 2022
63
December, 2017
60
March, 2020
51
November, 2019
47
September, 2023
44
October, 2018
35
December, 2018
26
May, 2019
25
February, 2020
23
February, 2018
23
January, 2019
20
April, 2019
19
April, 2020
15
May, 2023
11
October, 2017
10
November, 2020
8
January, 2018
8
January, 2021
6
April, 2018
6
September, 2017
5
December, 2019
5
March, 2019
5
May, 2024
4
March, 2023
1
August, 2018
1
August, 2022
1
October, 2022
Available data
73
bam
71
bigWig
47
tsv
14
bed bedMethyl
14
bigBed bedMethyl
13
bed narrowPeak
10
fastq
2
bigBed narrowPeak
2
tagAlign
1
bed broadPeak
Organism
88
Homo sapiens
Biosample type
88
tissue
primary cell
Organ
20
heart
15
brain
11
adipose tissue
11
connective tissue
11
pancreas
8
liver
7
blood vessel
7
musculature of body
7
vasculature
5
limb
4
kidney
1
artery
1
pericardium
1
spleen
Project
88
AMP
Genome assembly (visualization)
69
GRCh38
67
hg19
Lab
87
AMP-T2D consortium
1
Stephen Parker, UMich
target.investigated_as!
histone
biosample_type!
primary cell
BIOSAMPLE
ASSAY
88 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
small RNA-seq
ATAC-seq
WGBS
RRBS
Hi-C
ChIP-seq
FAIRE-seq
tissue
heart left ventricle
2
2
4
1
body of pancreas
2
2
4
omental fat pad
4
1
1
right lobe of liver
2
2
1
subcutaneous adipose tissue
4
1
+ See 27 more…
See all biosamples
Download