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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ATAC-seq
20
total RNA-seq
3
ChIP-seq
2
Hi-C
Assay category
26
DNA accessibility
20
Transcription
3
DNA binding
2
3D chromatin structure
Target of assay
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
667
February, 2021
312
November, 2017
298
August, 2021
192
August, 2017
171
May, 2021
167
May, 2020
163
June, 2019
120
July, 2018
117
February, 2023
105
October, 2019
87
November, 2018
77
July, 2019
66
May, 2022
63
December, 2017
60
March, 2020
51
November, 2019
47
September, 2023
44
October, 2018
35
December, 2018
26
May, 2019
25
February, 2020
23
February, 2018
23
January, 2019
20
April, 2019
19
April, 2020
15
May, 2023
11
October, 2017
10
November, 2020
8
January, 2018
8
January, 2021
6
April, 2018
6
September, 2017
5
December, 2019
5
March, 2019
4
March, 2023
1
August, 2018
1
August, 2022
1
October, 2022
Available data
49
bam
27
bed narrowPeak
21
bigWig
20
tsv
2
bedpe bed3+
2
hic
Organism
51
Homo sapiens
Biosample type
40
tissue
6
cell line
5
in vitro differentiated cells
Organ
45
pancreas
6
epithelium
1
adipose tissue
1
connective tissue
Project
51
AMP
Genome assembly (visualization)
49
hg19
47
GRCh38
Lab
51
AMP-T2D consortium
Audit category:
12
inconsistent ontology term
target.investigated_as!
histone
biosample_type!
primary cell
BIOSAMPLE
ASSAY
51 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
19
19
1
adipose tissue(adipose white tissue)
1
cell line
EndoC_BH1
1
1
3
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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