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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ChIP-seq
3
ATAC-seq
3
DNase-seq
1
RRBS
Assay category
45
DNA binding
6
DNA accessibility
1
DNA methylation
Target of assay
histone
75
histone modification
38
narrow histone mark
36
broad histone mark
24
transcription factor
21
control
6
RNA binding protein
3
chromatin remodeller
Date released
306
November, 2017
219
May, 2021
170
February, 2021
148
May, 2020
134
May, 2022
110
February, 2023
70
August, 2021
62
November, 2018
59
September, 2020
52
August, 2017
48
July, 2018
44
October, 2019
43
April, 2018
41
September, 2018
36
June, 2019
31
July, 2019
28
December, 2018
23
February, 2018
23
March, 2020
22
January, 2019
20
December, 2017
12
November, 2020
11
November, 2019
8
January, 2021
7
August, 2020
7
December, 2019
6
January, 2018
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
May, 2019
2
October, 2018
Available data
49
bam
49
fastq
31
bigWig
25
bed narrowPeak
8
bigBed narrowPeak
7
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
3
tagAlign
1
bed bedMethyl
1
bigBed bedMethyl
Organism
52
Homo sapiens
Biosample type
tissue
31
in vitro differentiated cells
21
primary cell
Organ
31
connective tissue
15
epithelium
15
pancreas
Project
52
AMP
Genome assembly (visualization)
33
hg19
28
GRCh38
Lab
52
AMP-T2D consortium
Audit category:
5
missing controlled_by
Audit category:
6
inconsistent control read length
target.investigated_as!
histone
biosample_type!
tissue
BIOSAMPLE
ASSAY
52 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
RRBS
in vitro differentiated cells
adipocyte
30
1
primary cell
pancreatic alpha cell
6
1
pancreatic beta cell
6
1
skeletal muscle myoblast
3
2
1
pancreatic acinar cell
1
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