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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
300
ChIP-seq
Assay category
300
DNA binding
Target of assay
241
transcription factor
66
recombinant protein
56
control
34
RNA binding protein
15
chromatin remodeller
histone
15
histone modification
8
broad histone mark
7
narrow histone mark
2
other context
2
other post-translational modification
Date released
300
November, 2017
96
February, 2021
61
November, 2018
41
August, 2021
28
December, 2018
23
October, 2019
22
January, 2019
20
May, 2021
10
March, 2020
6
February, 2023
6
November, 2019
6
November, 2020
2
March, 2023
1
January, 2018
1
May, 2020
1
October, 2022
Available data
300
fastq
299
bam
253
bigWig
236
bed narrowPeak
236
bigBed narrowPeak
44
bed broadPeak
44
bigBed broadPeak
3
tar
1
tagAlign
Organism
300
Homo sapiens
Biosample type
300
cell line
12
tissue
6
primary cell
Organ
300
liver
Project
300
AMP
Genome assembly (visualization)
251
hg19
204
GRCh38
Lab
300
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
histone
BIOSAMPLE
ASSAY
300 results
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ChIP-seq
cell line
HepG2
300
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