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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ATAC-seq
20
ChIP-seq
17
pCHi-C
9
total RNA-seq
1
DNAme array
Assay category
21
DNA accessibility
20
DNA binding
9
Transcription
1
DNA methylation
Target of assay
histone
54
histone modification
32
broad histone mark
22
narrow histone mark
12
transcription factor
8
control
5
RNA binding protein
Date released
266
August, 2021
205
February, 2023
176
May, 2022
143
February, 2021
68
May, 2021
59
September, 2020
58
May, 2020
48
March, 2020
47
September, 2023
41
October, 2019
33
August, 2017
26
July, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
10
November, 2020
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2023
4
July, 2018
4
March, 2019
4
October, 2022
2
November, 2019
2
October, 2017
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2017
1
November, 2018
1
September, 2018
Available data
bam
187
bigWig
173
tsv
17
bed narrowPeak
5
tagAlign
2
bed bed3+
Organism
68
Homo sapiens
Biosample type
27
in vitro differentiated cells
23
primary cell
16
cell line
2
tissue
Organ
17
pancreas
16
epithelium
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
51
AMP
17
T1D
Genome assembly (visualization)
10
hg19
Lab
50
Kyle Gaulton, UCSD
18
AMP-T2D consortium
Audit category:
17
inconsistent ontology term
target.investigated_as!
histone
files.file_type!
bam
BIOSAMPLE
ASSAY
68 results
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Clear Filters
ATAC-seq
ChIP-seq
pCHi-C
total RNA-seq
DNAme array
in vitro differentiated cells
embryonic stem cell
5
17
5
primary cell
CD8-positive, alpha-beta T cell
3
1
2
monocyte
1
1
1
CD4-positive, alpha-beta T cell
2
B cell
1
activated CD4-positive, alpha-beta T cell
1
+ See 10 more…
cell line
EndoC_BH1
16
tissue
pancreas
1
thymus
1
See all biosamples
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