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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ChIP-seq
2
ATAC-seq
Assay category
4
DNA binding
2
DNA accessibility
Target of assay
histone
4
histone modification
4
transcription factor
3
broad histone mark
1
narrow histone mark
Date released
4
November, 2017
1
March, 2019
1
October, 2017
Available data
2608
bam
2296
bigWig
1600
tsv
1129
fastq
bed narrowPeak
651
bigBed narrowPeak
257
bed broadPeak
255
bigBed broadPeak
248
bed bed3+
161
txt
153
zippedFastqFolder
77
tagAlign
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
vcf
Organism
6
Homo sapiens
Biosample type
4
cell line
2
tissue
Organ
4
liver
2
pancreas
Project
6
AMP
Genome assembly (visualization)
5
hg19
1
GRCh38
Lab
4
AMP-T2D consortium
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
target.investigated_as!
histone
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
6 results
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ChIP-seq
ATAC-seq
cell line
HepG2
4
tissue
islet of Langerhans
2
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