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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
312
ChIP-seq
Assay category
312
DNA binding
Target of assay
241
transcription factor
histone
85
histone modification
68
control
66
recombinant protein
50
broad histone mark
35
narrow histone mark
34
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
667
February, 2021
312
November, 2017
297
August, 2021
192
August, 2017
171
May, 2021
167
May, 2020
163
June, 2019
120
July, 2018
117
February, 2023
105
October, 2019
87
November, 2018
77
July, 2019
66
May, 2022
63
December, 2017
60
March, 2020
51
November, 2019
47
September, 2023
44
October, 2018
35
December, 2018
26
May, 2019
25
February, 2020
23
February, 2018
23
January, 2019
20
April, 2019
19
April, 2020
15
May, 2023
11
October, 2017
10
November, 2020
8
January, 2018
8
January, 2021
6
April, 2018
6
September, 2017
5
December, 2019
5
March, 2019
5
May, 2024
4
March, 2023
1
August, 2018
1
August, 2022
1
October, 2022
Available data
311
bam
300
fastq
253
bigWig
236
bed narrowPeak
236
bigBed narrowPeak
44
bed broadPeak
44
bigBed broadPeak
11
tagAlign
3
tar
Organism
312
Homo sapiens
Biosample type
300
cell line
12
tissue
primary cell
Organ
300
liver
12
brain
Project
312
AMP
Genome assembly (visualization)
251
hg19
204
GRCh38
Lab
312
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
histone
files.file_type!
vcf
biosample_type!
primary cell
BIOSAMPLE
ASSAY
312 results
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Clear Filters
ChIP-seq
cell line
HepG2
300
tissue
layer of hippocampus
3
caudate nucleus
2
cingulate gyrus
2
middle frontal area 46
2
substantia nigra
2
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