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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
total RNA-seq
14
ChIP-seq
10
ATAC-seq
4
DNase-seq
Assay category
53
Transcription
14
DNA accessibility
14
DNA binding
Target of assay
histone
20
histone modification
14
broad histone mark
9
control
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
66
February, 2021
8
October, 2019
3
May, 2019
2
July, 2019
2
June, 2019
Available data
81
bam
64
bigWig
57
tsv
54
bed narrowPeak
6
tagAlign
5
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
81
Homo sapiens
Biosample type
66
cell line
14
tissue
1
primary cell
Organ
602
liver
559
connective tissue
552
pancreas
441
adipose tissue
epithelium
150
heart
114
kidney
114
vasculature
110
blood vessel
82
artery
77
brain
66
bone element
66
limb
59
blood
59
bodily fluid
43
musculature of body
24
embryo
18
nerve
18
spleen
18
ureter
8
skeleton
6
eye
5
vein
1
pericardium
Project
81
AMP
Genome assembly (visualization)
72
GRCh38
72
hg19
Lab
81
AMP-T2D consortium
target.investigated_as!
histone
organ_slims!
epithelium
BIOSAMPLE
ASSAY
81 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
cell line
smooth muscle cell of the coronary artery
52
6
8
tissue
tibial artery
5
1
2
coronary artery
3
1
2
primary cell
smooth muscle cell of the coronary artery
1
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