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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ATAC-seq
Assay category
11
DNA accessibility
Date released
10
February, 2023
1
February, 2021
Available data
2607
bam
2296
bigWig
1600
tsv
1129
fastq
961
bed narrowPeak
651
bigBed narrowPeak
257
bed broadPeak
255
bigBed broadPeak
248
bed bed3+
161
txt
153
zippedFastqFolder
77
tagAlign
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
11
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
vcf
Organism
11
Homo sapiens
Biosample type
5
in vitro differentiated cells
5
tissue
1
primary cell
Organ
6
connective tissue
4
bone element
4
skeleton
1
brain
Project
11
AMP
Genome assembly (visualization)
11
hg19
1
GRCh38
Lab
11
AMP-T2D consortium
Audit category:
inconsistent replicate
target.investigated_as!
histone
audit.ERROR.category!
inconsistent replicate
BIOSAMPLE
ASSAY
11 results
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ATAC-seq
in vitro differentiated cells
chondrocyte
5
tissue
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
pubis
1
primary cell
osteoblast
1
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