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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
DNase-seq
5
ChIP-seq
1
FAIRE-seq
Assay category
12
DNA accessibility
5
DNA binding
Target of assay
histone
66
histone modification
41
broad histone mark
25
narrow histone mark
5
RNA binding protein
5
transcription factor
Date released
7
June, 2019
5
October, 2019
3
May, 2019
2
November, 2017
Available data
114
bam
87
bigWig
68
tsv
67
bed narrowPeak
17
bigBed narrowPeak
13
bed bed3+
13
bed broadPeak
13
bigBed broadPeak
6
tagAlign
4
fastq
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
17
Homo sapiens
Biosample type
9
primary cell
8
tissue
Organ
323
liver
82
kidney
53
blood
53
bodily fluid
47
epithelium
42
pancreas
38
heart
36
brain
36
limb
33
musculature of body
19
connective tissue
18
ureter
17
vasculature
14
blood vessel
9
adipose tissue
7
spleen
5
artery
5
eye
3
vein
2
nerve
Project
17
AMP
Genome assembly (visualization)
16
GRCh38
16
hg19
Lab
17
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
target.investigated_as!
histone
BIOSAMPLE
ASSAY
17 results
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Clear Filters
DNase-seq
ChIP-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
2
1
brain microvascular endothelial cell
1
1
choroid plexus epithelial cell
1
1
kidney capillary endothelial cell
1
smooth muscle cell of the brain vasculature
1
tissue
coronary artery
2
1
ascending aorta
1
1
tibial artery
2
thoracic aorta
1
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