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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
DNase-seq
4
ChIP-seq
1
FAIRE-seq
Assay category
10
DNA accessibility
4
DNA binding
Target of assay
histone
65
histone modification
41
broad histone mark
24
narrow histone mark
4
RNA binding protein
4
transcription factor
Date released
5
June, 2019
5
October, 2019
3
May, 2019
1
November, 2017
Available data
110
bam
83
bigWig
68
tsv
64
bed narrowPeak
14
bigBed narrowPeak
11
bed bed3+
10
bed broadPeak
10
bigBed broadPeak
6
tagAlign
3
hic
2
bedpe bed3+
2
fastq
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
14
Homo sapiens
Biosample type
8
tissue
6
primary cell
Organ
323
liver
82
kidney
53
blood
53
bodily fluid
47
epithelium
42
pancreas
38
heart
36
brain
36
limb
33
musculature of body
19
connective tissue
18
ureter
17
vasculature
14
blood vessel
9
adipose tissue
7
spleen
5
artery
5
eye
3
vein
2
nerve
Project
14
AMP
Genome assembly (visualization)
13
GRCh38
13
hg19
Lab
14
AMP-T2D consortium
target.investigated_as!
histone
BIOSAMPLE
ASSAY
14 results
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DNase-seq
ChIP-seq
FAIRE-seq
tissue
coronary artery
2
1
ascending aorta
1
1
tibial artery
2
thoracic aorta
1
primary cell
endothelial cell of umbilical vein
2
1
brain microvascular endothelial cell
1
1
kidney capillary endothelial cell
1
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