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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
203
total RNA-seq
45
ATAC-seq
Assay category
203
Transcription
45
DNA accessibility
Target of assay
histone
43
histone modification
35
narrow histone mark
8
broad histone mark
Date released
574
February, 2021
257
November, 2017
233
May, 2020
200
May, 2021
168
June, 2019
164
July, 2018
154
August, 2017
91
July, 2019
71
November, 2018
49
April, 2018
49
November, 2019
47
December, 2017
46
October, 2019
45
February, 2023
42
August, 2021
40
September, 2018
39
May, 2022
30
December, 2018
29
March, 2020
19
January, 2019
17
October, 2018
15
February, 2018
7
October, 2017
7
September, 2017
6
November, 2020
5
April, 2019
5
December, 2019
5
May, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
248
bam
248
bigWig
203
tsv
15
fastq
Organism
248
Homo sapiens
Biosample type
143
tissue
90
primary cell
15
in vitro differentiated cells
Organ
143
liver
4
embryo
Project
203
AMP
45
T1D
Genome assembly (visualization)
248
hg19
203
GRCh38
Lab
203
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
target.investigated_as!
histone
BIOSAMPLE
ASSAY
248 results
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Clear Filters
total RNA-seq
ATAC-seq
tissue
liver
143
primary cell
B cell
2
2
CD8-positive, alpha-beta T cell
2
2
T follicular helper cell
2
2
T-helper 1 cell
2
2
T-helper 17 cell
2
2
+ See 20 more…
in vitro differentiated cells
pancreatic endoderm
4
definitive endodermal cell
2
embryonic stem cell
2
endocrine cell
2
posterior foregut
2
+ See 2 more…
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