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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
174
DNase-seq
12
ChIP-seq
1
snATAC-seq
Assay category
175
DNA accessibility
12
DNA binding
Target of assay
histone
12
histone modification
9
transcription factor
6
broad histone mark
6
narrow histone mark
3
control
2
RNA binding protein
Date released
162
June, 2019
10
August, 2017
8
November, 2018
4
October, 2019
2
September, 2017
1
May, 2022
Available data
1003
bam
830
bigWig
677
tsv
454
bed narrowPeak
262
fastq
240
bigBed narrowPeak
187
bed bed3+
176
bed broadPeak
174
bigBed broadPeak
157
txt
64
xls
51
tagAlign
23
bed bedMethyl
23
bigBed bedMethyl
11
hic
10
bedpe bed3+
6
csv
5
bed bed3
1
bedpe
Organism
187
Homo sapiens
Biosample type
187
tissue
34
primary cell
17
in vitro differentiated cells
3
cell line
1
stem cell
Organ
68
kidney
36
limb
33
musculature of body
27
brain
27
heart
18
ureter
15
pancreas
adipose tissue
6
connective tissue
6
liver
5
blood vessel
5
vasculature
4
artery
3
eye
2
nerve
1
spleen
Project
187
AMP
Genome assembly (visualization)
186
GRCh38
171
hg19
Lab
187
AMP-T2D consortium
Audit category:
1
audit script error
1
inconsistent ontology term
Audit category:
6
missing controlled_by
target.investigated_as!
histone
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
187 results
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DNase-seq
ChIP-seq
snATAC-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
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