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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
total RNA-seq
15
small RNA-seq
8
WGBS
6
ATAC-seq
4
Hi-C
3
single cell RNA-seq
2
FAIRE-seq
Assay category
53
Transcription
8
DNA accessibility
8
DNA methylation
4
3D chromatin structure
Target of assay
3
control
Date released
259
November, 2017
233
May, 2020
190
June, 2019
187
May, 2021
165
February, 2021
164
July, 2018
135
August, 2017
79
November, 2018
73
July, 2019
49
April, 2018
42
December, 2017
40
September, 2018
37
October, 2019
30
December, 2018
28
August, 2021
21
November, 2019
20
May, 2022
19
January, 2019
17
March, 2020
15
February, 2018
12
October, 2018
7
August, 2020
7
January, 2018
7
October, 2017
5
April, 2019
5
December, 2019
5
May, 2019
5
May, 2024
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
73
bigWig
70
bam
53
tsv
23
bed bedMethyl
23
bigBed bedMethyl
7
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
73
Homo sapiens
Biosample type
53
tissue
20
primary cell
Organ
21
heart
17
connective tissue
16
brain
adipose tissue
10
blood vessel
10
vasculature
8
liver
7
epithelium
7
kidney
5
musculature of body
4
pancreas
3
artery
1
limb
1
pericardium
Project
73
AMP
Genome assembly (visualization)
67
GRCh38
64
hg19
Lab
73
AMP-T2D consortium
target.investigated_as!
histone
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
73 results
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total RNA-seq
small RNA-seq
WGBS
ATAC-seq
Hi-C
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle
2
2
2
body of pancreas
2
2
heart
2
1
1
right lobe of liver
2
2
frontal cortex
1
1
1
+ See 19 more…
primary cell
cerebellar granule cell
2
skeletal muscle satellite cell
1
1
Purkinje cell
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
+ See 13 more…
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