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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
53
DNA binding
9
DNA accessibility
Target of assay
51
transcription factor
10
RNA binding protein
10
chromatin remodeller
control
histone
1
histone modification
1
narrow histone mark
Date released
27
December, 2018
14
January, 2019
12
November, 2018
8
January, 2021
1
January, 2018
Available data
54
bigWig
53
bam
53
bed narrowPeak
53
bigBed narrowPeak
53
fastq
Organism
62
Homo sapiens
Biosample type
54
cell line
8
primary cell
Organ
742
pancreas
581
liver
571
connective tissue
435
adipose tissue
401
epithelium
312
kidney
271
heart
159
bone element
143
vasculature
139
blood vessel
112
artery
68
brain
62
blood
62
bodily fluid
57
eye
57
musculature of body
56
limb
20
lung
18
embryo
18
ureter
16
skeleton
11
spleen
8
nerve
5
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
54
AMP
8
T1D
Genome assembly (visualization)
54
hg19
53
GRCh38
Lab
54
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
target.investigated_as!
histone
control
BIOSAMPLE
ASSAY
62 results
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ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
53
1
primary cell
peripheral blood mononuclear cell
8
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