Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
204
DNase-seq
28
ChIP-seq
5
Hi-C
4
ATAC-seq
2
Capture-C
2
pCHi-C
2
total RNA-seq
1
snATAC-seq
Assay category
28
DNA binding
Target of assay
histone
25
histone modification
19
transcription factor
13
narrow histone mark
broad histone mark
9
control
2
RNA binding protein
Date released
21
August, 2017
5
December, 2017
2
September, 2017
Available data
794
bam
628
fastq
522
bigWig
475
bed narrowPeak
410
bigBed narrowPeak
77
tagAlign
49
bed broadPeak
49
bigBed broadPeak
28
bed bed3+
3
tar
Organism
28
Homo sapiens
Biosample type
16
tissue
11
in vitro differentiated cells
1
stem cell
Organ
11
connective tissue
9
pancreas
4
adipose tissue
3
liver
1
embryo
Project
28
AMP
Genome assembly (visualization)
28
GRCh38
28
hg19
Lab
28
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
4
inconsistent control read length
target.investigated_as!
histone
broad histone mark
BIOSAMPLE
ASSAY
28 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
tissue
islet of Langerhans
9
white adipose tissue
4
liver
3
in vitro differentiated cells
adipocyte
7
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
stem cell
hESC
1
Download