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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
ChIP-seq
Assay category
73
DNA binding
Target of assay
1017
histone modification
histone
514
narrow histone mark
501
broad histone mark
450
transcription factor
337
control
93
RNA binding protein
73
recombinant protein
29
chromatin remodeller
5
nucleotide modification
2
other context
2
other post-translational modification
Date released
66
November, 2017
November, 2018
7
October, 2019
Available data
73
bam
73
bed narrowPeak
73
bigWig
66
bigBed narrowPeak
66
fastq
Organism
73
Homo sapiens
Biosample type
73
cell line
Organ
66
liver
7
kidney
Project
73
AMP
Genome assembly (visualization)
73
GRCh38
72
hg19
Lab
73
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
Audit category:
1
inconsistent control read length
target.investigated_as!
histone
month_released!
November, 2018
BIOSAMPLE
ASSAY
73 results
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ChIP-seq
cell line
HepG2
66
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
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