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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
14
ChIP-seq
2
single cell RNA-seq
Assay category
58
Transcription
DNA accessibility
14
DNA binding
Target of assay
20
histone
histone modification
14
broad histone mark
9
control
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
58
February, 2021
5
October, 2019
3
May, 2019
2
August, 2021
2
February, 2020
2
July, 2019
Available data
68
bam
59
bigWig
58
tsv
6
tagAlign
5
bed narrowPeak
1
bigBed narrowPeak
Organism
72
Homo sapiens
Biosample type
58
cell line
12
tissue
2
primary cell
Organ
659
liver
622
pancreas
572
connective tissue
451
adipose tissue
308
epithelium
219
heart
161
kidney
147
bone element
107
vasculature
104
blood vessel
72
artery
62
brain
59
blood
59
bodily fluid
29
limb
28
musculature of body
26
eye
25
embryo
17
spleen
16
nerve
10
lung
4
skeleton
4
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
72
AMP
Genome assembly (visualization)
59
GRCh38
59
hg19
Lab
72
AMP-T2D consortium
target.investigated_as!
histone modification
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
72 results
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total RNA-seq
ChIP-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
6
tissue
tibial artery
1
5
coronary artery
1
3
pulmonary artery
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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