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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
318
ChIP-seq
Assay category
318
DNA binding
Target of assay
244
transcription factor
88
histone
histone modification
71
control
66
recombinant protein
50
broad histone mark
38
narrow histone mark
37
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
318
November, 2017
199
June, 2019
152
February, 2021
140
May, 2022
124
May, 2020
123
August, 2017
119
August, 2021
111
February, 2023
88
October, 2019
87
November, 2018
77
May, 2021
63
December, 2017
46
March, 2020
44
October, 2018
43
July, 2019
35
December, 2018
31
November, 2019
28
May, 2019
20
April, 2019
18
January, 2019
16
January, 2021
14
September, 2018
12
November, 2020
11
May, 2023
11
October, 2017
11
September, 2017
10
April, 2020
8
February, 2018
8
January, 2018
7
August, 2020
5
March, 2019
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2018
1
August, 2022
1
March, 2023
Available data
317
bam
306
fastq
259
bigWig
239
bed narrowPeak
239
bigBed narrowPeak
47
bed broadPeak
47
bigBed broadPeak
11
tagAlign
3
tar
Organism
318
Homo sapiens
Biosample type
300
cell line
12
tissue
6
primary cell
Organ
300
liver
18
brain
4
epithelium
4
vasculature
2
blood vessel
Project
318
AMP
Genome assembly (visualization)
257
hg19
207
GRCh38
Lab
318
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
histone modification
assay_slims!
Transcription
BIOSAMPLE
ASSAY
318 results
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Clear Filters
ChIP-seq
cell line
HepG2
300
tissue
layer of hippocampus
3
caudate nucleus
2
cingulate gyrus
2
middle frontal area 46
2
substantia nigra
2
+ See 1 more…
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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