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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
59
total RNA-seq
13
single cell RNA-seq
3
ATAC-seq
1
MPRA
1
snATAC-seq
Assay category
13
Transcription
3
DNA accessibility
Date released
8
August, 2021
5
February, 2021
3
February, 2023
Available data
278
bed narrowPeak
275
bam
236
bigWig
219
tsv
189
fastq
91
zippedFastqFolder
64
xls
27
bigBed narrowPeak
16
txt
12
bed bed3
8
csv
7
bed bedgraph
4
bed bed3+
2
bed broadPeak
Organism
16
Homo sapiens
Biosample type
13
tissue
3
in vitro differentiated cells
Organ
13
kidney
Project
16
AMP
Genome assembly (visualization)
3
hg19
Lab
8
Katalin Susztak, Upenn
5
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
5
audit script error
1
inconsistent ontology term
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
16 results
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single cell RNA-seq
ATAC-seq
tissue
kidney
13
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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