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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
single cell RNA-seq
72
total RNA-seq
47
ATAC-seq
32
ChIP-seq
30
DNase-seq
8
WGBS
3
Hi-C
3
pCHi-C
2
RRBS
1
small RNA-seq
Assay category
32
DNA binding
Target of assay
62
histone
histone modification
37
broad histone mark
25
narrow histone mark
20
control
12
transcription factor
6
RNA binding protein
Date released
15
April, 2019
8
May, 2019
6
February, 2021
3
June, 2019
Available data
32
bam
12
bed narrowPeak
12
bigWig
8
bigBed narrowPeak
6
tagAlign
Organism
32
Homo sapiens
Biosample type
23
tissue
6
cell line
3
primary cell
Organ
449
liver
75
connective tissue
67
pancreas
59
blood
59
bodily fluid
41
adipose tissue
36
epithelium
32
heart
31
brain
31
vasculature
29
blood vessel
22
kidney
17
limb
14
artery
14
spleen
11
nerve
10
embryo
6
musculature of body
2
eye
2
vein
Project
32
AMP
Genome assembly (visualization)
12
GRCh38
12
hg19
Lab
32
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
32 results
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ChIP-seq
tissue
heart left ventricle
11
right atrium auricular region
4
coronary artery
3
heart
2
heart right ventricle
2
+ See 1 more…
cell line
smooth muscle cell of the coronary artery
6
primary cell
cardiac fibroblast
3
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