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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
6
WGBS
2
pCHi-C
2
total RNA-seq
1
RNA microarray
Assay category
24
DNA binding
6
DNA methylation
2
Transcription
Target of assay
30
histone
histone modification
24
control
20
broad histone mark
10
narrow histone mark
Date released
18
October, 2018
12
August, 2017
2
February, 2020
1
August, 2018
1
August, 2021
1
March, 2020
Available data
23
fastq
21
bam
3
tsv
2
bed bedMethyl
2
bigBed bedMethyl
2
bigWig
1
bedpe bed3+
1
tagAlign
Organism
34
Homo sapiens
Biosample type
34
tissue
1
in vitro differentiated cells
Organ
279
pancreas
225
kidney
210
epithelium
165
heart
146
liver
89
bone element
68
blood vessel
68
vasculature
52
brain
52
connective tissue
48
artery
35
adipose tissue
25
eye
25
limb
20
lung
17
musculature of body
14
blood
14
bodily fluid
12
nerve
11
spleen
7
embryo
4
skeleton
2
intestine
2
thymus
2
vein
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
35
AMP
Genome assembly (visualization)
hg19
423
GRCh38
Lab
35
AMP-T2D consortium
target.investigated_as!
histone modification
assembly!
hg19
BIOSAMPLE
ASSAY
35 results
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Clear Filters
ChIP-seq
WGBS
pCHi-C
total RNA-seq
RNA microarray
tissue
subcutaneous adipose tissue
10
1
1
omental fat pad
8
1
subcutaneous abdominal adipose tissue
5
3
adipose tissue
1
3
1
in vitro differentiated cells
white fat cell
1
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