Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
DNase-seq
4
total RNA-seq
2
small RNA-seq
1
WGBS
Assay category
33
DNA accessibility
6
Transcription
1
DNA methylation
Target of assay
13
histone
histone modification
8
broad histone mark
5
narrow histone mark
Date released
33
June, 2019
5
July, 2019
2
March, 2020
Available data
40
bam
40
bigWig
33
bed bed3+
33
bed broadPeak
33
bed narrowPeak
33
bigBed broadPeak
33
bigBed narrowPeak
6
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
40
Homo sapiens
Biosample type
37
tissue
3
primary cell
Organ
532
connective tissue
499
pancreas
461
liver
423
adipose tissue
206
epithelium
175
kidney
165
heart
125
vasculature
122
blood vessel
108
artery
66
bone element
53
blood
53
bodily fluid
49
brain
49
limb
40
musculature of body
18
embryo
18
ureter
10
spleen
8
skeleton
7
nerve
5
eye
2
vein
1
pericardium
Project
40
AMP
Genome assembly (visualization)
46
hg19
40
GRCh38
Lab
40
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
40 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
total RNA-seq
small RNA-seq
WGBS
tissue
muscle of arm
17
muscle of leg
13
1
psoas muscle
2
skeletal muscle tissue
1
1
forelimb muscle
1
+ See 1 more…
primary cell
skeletal muscle satellite cell
1
1
skeletal muscle cell
1
See all biosamples
Download