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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
85
single cell RNA-seq
ATAC-seq
48
snATAC-seq
47
WGBS
3
Hi-C
Assay category
85
Transcription
48
DNA accessibility
47
DNA methylation
3
3D chromatin structure
Date released
95
May, 2022
45
February, 2021
40
September, 2020
3
October, 2022
Available data
114
zippedFastqFolder
67
fastq
6
tsv
3
bedpe bed3+
3
cool
3
hic
Organism
183
Homo sapiens
Biosample type
183
primary cell
Organ
50
epithelium
50
pancreas
Project
1556
AMP
183
HPAP
47
KPMP
40
T1D
19
LungMap
4
community
1
ITG
Genome assembly (visualization)
3
hg19
Lab
183
Klaus Kaestner, Upenn
Audit category:
30
audit script error
target.investigated_as!
histone modification
assay_title!
ATAC-seq
total RNA-seq
BIOSAMPLE
ASSAY
183 results
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single cell RNA-seq
snATAC-seq
WGBS
Hi-C
primary cell
Langerhans cell
85
48
pancreatic alpha cell
31
1
pancreatic beta cell
16
1
pancreatic acinar cell
1
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