Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
85
single cell RNA-seq
ATAC-seq
48
snATAC-seq
47
WGBS
Assay category
177
Transcription
48
DNA accessibility
47
DNA methylation
Date released
95
May, 2022
76
February, 2023
56
September, 2020
45
February, 2021
Available data
159
fastq
114
zippedFastqFolder
6
tsv
3
bedpe bed3+
3
cool
hic
Organism
272
Homo sapiens
Biosample type
272
primary cell
Organ
100
epithelium
100
pancreas
Project
2873
AMP
272
HPAP
145
T1D
47
KPMP
19
LungMap
4
community
Lab
272
Klaus Kaestner, Upenn
Audit category:
27
audit script error
target.investigated_as!
histone modification
assay_title!
ATAC-seq
files.file_type!
hic
BIOSAMPLE
ASSAY
272 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
snATAC-seq
WGBS
primary cell
Langerhans cell
85
48
pancreatic alpha cell
42
31
exocrine cell
39
pancreatic beta cell
11
16
Download