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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
4
total RNA-seq
1
Hi-C
Assay category
9
DNA binding
4
Transcription
1
3D chromatin structure
Target of assay
9
control
1
broad histone mark
1
histone
histone modification
Date released
82
February, 2021
64
November, 2017
30
August, 2021
20
May, 2021
14
October, 2019
10
March, 2020
8
January, 2019
6
February, 2023
6
November, 2020
5
November, 2018
4
November, 2019
2
March, 2023
1
December, 2018
1
January, 2018
1
May, 2020
1
October, 2022
Available data
22
bam
14
bigWig
bed narrowPeak
4
tsv
2
bed bed3+
2
bigBed narrowPeak
1
bed broadPeak
1
bigBed broadPeak
1
hdf5
Organism
14
Homo sapiens
Biosample type
68
tissue
14
cell line
8
primary cell
6
in vitro differentiated cells
Organ
7
kidney
7
pancreas
1
epithelium
Project
14
AMP
Genome assembly (visualization)
5
GRCh38
5
hg19
Lab
14
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
1
inconsistent assembly
target.investigated_as!
histone modification
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
14 results
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ChIP-seq
total RNA-seq
Hi-C
cell line
Panc1
6
1
RCC 7860 HIF1a re-expression
1
1
RCC 7860 HIF2a over-expression
1
1
RCC 7860 vector
1
1
glomerular visceral epithelial cell
1
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