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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
5
total RNA-seq
2
DNase-seq
1
ATAC-seq
Assay category
11
DNA binding
5
Transcription
3
DNA accessibility
Target of assay
24
histone
histone modification
16
broad histone mark
11
control
8
narrow histone mark
Date released
18
October, 2019
1
February, 2020
Available data
18
bam
7
bigWig
5
tsv
3
bed narrowPeak
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
2
bigBed narrowPeak
Organism
19
Homo sapiens
Biosample type
19
tissue
Organ
743
pancreas
683
liver
600
connective tissue
453
adipose tissue
382
epithelium
322
kidney
280
heart
159
bone element
149
vasculature
144
blood vessel
118
artery
96
brain
71
limb
68
blood
68
bodily fluid
61
musculature of body
58
eye
25
embryo
20
lung
19
nerve
18
ureter
17
spleen
16
skeleton
7
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
19
AMP
Genome assembly (visualization)
7
GRCh38
7
hg19
Lab
19
AMP-T2D consortium
target.investigated_as!
histone modification
month_released!
May, 2019
assay_title!
WGBS
BIOSAMPLE
ASSAY
19 results
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ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
tissue
tibial nerve
11
5
2
1
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