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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
total RNA-seq
48
single cell RNA-seq
4
ATAC-seq
1
Hi-C
Assay category
168
Transcription
4
DNA accessibility
1
3D chromatin structure
Date released
715
February, 2021
318
November, 2017
314
May, 2020
299
August, 2021
259
May, 2021
212
August, 2017
205
February, 2023
200
May, 2022
199
June, 2019
168
July, 2018
118
October, 2019
108
July, 2019
88
November, 2018
63
December, 2017
61
March, 2020
59
September, 2020
51
November, 2019
49
April, 2018
47
September, 2023
46
October, 2018
41
September, 2018
35
December, 2018
28
May, 2019
25
February, 2020
23
February, 2018
23
January, 2019
20
April, 2019
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
165
bam
164
bigWig
164
tsv
51
fastq
1
bed broadPeak
1
bedpe
1
hic
Organism
173
Homo sapiens
Biosample type
125
tissue
48
primary cell
Organ
162
pancreas
33
epithelium
2
connective tissue
Project
173
AMP
Genome assembly (visualization)
167
hg19
166
GRCh38
Lab
168
AMP-T2D consortium
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
Audit category:
6
inconsistent ontology term
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
173 results
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Clear Filters
total RNA-seq
single cell RNA-seq
ATAC-seq
Hi-C
tissue
islet of Langerhans
120
4
1
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
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