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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
34
ATAC-seq
25
ChIP-seq
17
pCHi-C
1
DNAme array
Assay category
34
DNA accessibility
25
DNA binding
1
DNA methylation
Target of assay
140
histone
histone modification
76
broad histone mark
64
narrow histone mark
16
transcription factor
9
control
5
RNA binding protein
Date released
318
November, 2017
225
August, 2021
199
June, 2019
174
May, 2022
170
February, 2021
124
May, 2020
123
August, 2017
112
February, 2023
88
November, 2018
88
October, 2019
77
May, 2021
64
July, 2019
63
December, 2017
48
July, 2018
47
September, 2023
46
March, 2020
44
October, 2018
43
April, 2018
43
September, 2020
35
December, 2018
31
November, 2019
28
May, 2019
20
April, 2019
19
April, 2020
18
January, 2019
16
January, 2021
15
September, 2018
14
May, 2023
12
November, 2020
11
October, 2017
11
September, 2017
8
February, 2018
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
18
bam
17
bed narrowPeak
12
bigWig
5
tagAlign
Organism
77
Homo sapiens
Biosample type
33
primary cell
27
in vitro differentiated cells
16
cell line
1
tissue
Organ
18
epithelium
18
pancreas
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
60
AMP
17
T1D
Genome assembly (visualization)
25
hg19
17
GRCh38
Lab
42
Kyle Gaulton, UCSD
35
AMP-T2D consortium
Audit category:
20
inconsistent ontology term
target.investigated_as!
histone modification
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
77 results
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Clear Filters
ATAC-seq
ChIP-seq
pCHi-C
DNAme array
primary cell
monocyte
13
1
1
CD8-positive, alpha-beta T cell
3
1
CD4-positive, alpha-beta T cell
2
B cell
1
activated CD4-positive, alpha-beta T cell
1
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in vitro differentiated cells
embryonic stem cell
5
17
cardiomyocytes
3
pancreatic PP cell
2
cell line
EndoC_BH1
16
tissue
thymus
1
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