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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ATAC-seq
3
ChIP-seq
1
Hi-C
1
total RNA-seq
Assay category
7
DNA accessibility
3
DNA binding
1
3D chromatin structure
1
Transcription
Target of assay
10
histone
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
128
February, 2021
89
May, 2021
21
October, 2019
16
March, 2020
12
November, 2019
11
February, 2023
10
June, 2019
8
May, 2020
6
July, 2018
6
November, 2020
3
August, 2021
2
December, 2017
2
December, 2019
2
July, 2019
2
May, 2019
1
February, 2020
1
June, 2018
Available data
11
bam
8
bed narrowPeak
2
bigWig
1
bedpe bed3+
1
hic
1
tsv
Organism
12
Homo sapiens
Biosample type
6
cell line
5
in vitro differentiated cells
1
tissue
Organ
6
epithelium
6
pancreas
1
adipose tissue
1
connective tissue
Project
12
AMP
Genome assembly (visualization)
10
hg19
9
GRCh38
Lab
12
AMP-T2D consortium
Audit category:
12
inconsistent ontology term
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
12 results
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Clear Filters
ATAC-seq
ChIP-seq
Hi-C
total RNA-seq
cell line
EndoC_BH1
1
3
1
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
tissue
adipose tissue(adipose white tissue)
1
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