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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
314
ChIP-seq
Assay category
314
DNA binding
Target of assay
242
transcription factor
86
histone
histone modification
69
control
66
recombinant protein
50
broad histone mark
36
narrow histone mark
35
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
683
February, 2021
314
May, 2020
314
November, 2017
296
August, 2021
235
May, 2021
197
August, 2017
181
June, 2019
153
February, 2023
135
July, 2018
120
May, 2022
104
October, 2019
95
July, 2019
88
November, 2018
58
December, 2017
56
March, 2020
47
September, 2023
45
November, 2019
44
October, 2018
40
September, 2020
35
December, 2018
26
May, 2019
25
February, 2020
23
February, 2018
23
January, 2019
20
April, 2019
19
April, 2020
16
April, 2018
16
January, 2021
15
May, 2023
11
October, 2017
10
November, 2020
8
January, 2018
6
September, 2017
5
March, 2019
5
March, 2023
4
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
1
September, 2018
Available data
313
bam
302
fastq
255
bigWig
237
bed narrowPeak
237
bigBed narrowPeak
45
bed broadPeak
45
bigBed broadPeak
11
tagAlign
3
tar
Organism
314
Homo sapiens
Biosample type
300
cell line
12
tissue
2
primary cell
Organ
300
liver
18
brain
epithelium
4
vasculature
2
blood vessel
Project
314
AMP
Genome assembly (visualization)
253
hg19
205
GRCh38
Lab
314
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
histone modification
organ_slims!
epithelium
BIOSAMPLE
ASSAY
314 results
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Clear Filters
ChIP-seq
cell line
HepG2
300
tissue
layer of hippocampus
3
caudate nucleus
2
cingulate gyrus
2
middle frontal area 46
2
substantia nigra
2
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primary cell
astrocyte of the cerebellum
2
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