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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
6
total RNA-seq
1
GRO-seq
Assay category
10
DNA binding
6
Transcription
Target of assay
12
histone
histone modification
8
narrow histone mark
7
control
4
broad histone mark
3
transcription factor
Date released
7
December, 2017
7
February, 2018
2
May, 2021
1
January, 2018
Available data
16
bam
15
fastq
10
bigWig
6
tsv
3
bed narrowPeak
1
bed bed3+
Organism
17
Homo sapiens
Biosample type
17
in vitro differentiated cells
8
cell line
Organ
60
connective tissue
17
embryo
9
epithelium
3
liver
2
pancreas
1
adipose tissue
1
heart
Project
17
AMP
Genome assembly (visualization)
10
GRCh38
10
hg19
1
hg18
Lab
17
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
1
inconsistent control read length
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
17 results
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ChIP-seq
total RNA-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
8
4
1
Hepatic endoderm
2
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
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