Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
DNase-seq
17
ChIP-seq
8
ATAC-seq
4
Hi-C
1
WGBS
Assay category
44
DNA accessibility
17
DNA binding
Transcription
4
3D chromatin structure
1
DNA methylation
Target of assay
49
histone
histone modification
34
broad histone mark
17
control
15
narrow histone mark
Date released
32
June, 2019
22
October, 2019
6
February, 2021
5
July, 2019
1
May, 2019
Available data
62
bam
44
bed narrowPeak
39
bigWig
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
36
bigBed narrowPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
66
Homo sapiens
Biosample type
66
tissue
Organ
495
liver
316
pancreas
230
epithelium
199
kidney
125
connective tissue
125
heart
98
vasculature
97
bone element
93
blood vessel
75
brain
68
blood
68
bodily fluid
66
limb
63
artery
58
adipose tissue
54
musculature of body
39
eye
19
spleen
18
ureter
14
nerve
12
skeleton
11
embryo
11
lung
7
vein
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
66
AMP
Genome assembly (visualization)
45
GRCh38
44
hg19
Lab
66
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
target.investigated_as!
histone modification
assay_slims!
Transcription
BIOSAMPLE
ASSAY
66 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ChIP-seq
ATAC-seq
Hi-C
WGBS
tissue
muscle of arm
17
muscle of leg
13
1
1
tibial nerve
2
11
1
tibial artery
2
5
1
gastrocnemius medialis
4
+ See 8 more…
See all biosamples
Download