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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
total RNA-seq
50
ChIP-seq
9
WGBS
6
RRBS
5
ATAC-seq
5
DNase-seq
1
FAIRE-seq
Assay category
89
Transcription
50
DNA binding
15
DNA methylation
11
DNA accessibility
Target of assay
histone modification
198
histone
109
broad histone mark
88
narrow histone mark
50
control
transcription factor
8
RNA binding protein
3
chromatin remodeller
Date released
710
February, 2021
314
May, 2020
288
August, 2021
243
May, 2021
205
February, 2023
200
May, 2022
195
June, 2019
168
July, 2018
165
August, 2017
111
October, 2019
108
July, 2019
74
November, 2017
60
March, 2020
59
September, 2020
50
November, 2019
49
April, 2018
47
September, 2023
41
September, 2018
31
October, 2018
25
February, 2020
24
November, 2018
23
February, 2018
23
May, 2019
21
December, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
14
April, 2019
11
October, 2017
11
September, 2017
10
December, 2019
9
January, 2019
8
January, 2018
7
August, 2020
7
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
137
fastq
132
bam
102
bigWig
89
tsv
11
tagAlign
10
bed narrowPeak
10
bigBed narrowPeak
6
bed bedMethyl
6
bigBed bedMethyl
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
164
Homo sapiens
Biosample type
137
tissue
19
primary cell
9
in vitro differentiated cells
Organ
115
pancreas
22
connective tissue
17
liver
15
epithelium
13
adipose tissue
7
musculature of body
Project
165
AMP
Genome assembly (visualization)
106
hg19
100
GRCh38
Lab
165
AMP-T2D consortium
target.investigated_as!
histone modification
transcription factor
organ_slims!
ovary
BIOSAMPLE
ASSAY
165 results
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Clear Filters
total RNA-seq
ChIP-seq
WGBS
RRBS
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
89
7
1
1
liver
11
3
1
subcutaneous abdominal adipose tissue
5
3
skeletal muscle tissue
3
4
adipose tissue
1
3
+ See 3 more…
primary cell
pancreatic alpha cell
6
1
pancreatic beta cell
6
1
skeletal muscle myoblast
1
1
2
pancreatic acinar cell
1
in vitro differentiated cells
adipocyte
8
1
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