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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ChIP-seq
2
WGBS
1
ATAC-seq
1
pCHi-C
Assay category
8
DNA binding
2
DNA methylation
1
DNA accessibility
Target of assay
8
control
6
histone
histone modification
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
5
November, 2018
4
December, 2018
1
January, 2019
1
March, 2020
1
October, 2017
Available data
12
bam
12
fastq
4
bigWig
2
bed bedMethyl
2
bed narrowPeak
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
bigBed broadPeak
1
bigBed narrowPeak
1
tsv
Organism
12
Homo sapiens
Biosample type
12
tissue
Organ
769
pancreas
557
connective tissue
440
adipose tissue
406
epithelium
345
liver
249
heart
236
kidney
159
bone element
145
vasculature
143
blood vessel
112
artery
64
brain
53
eye
37
limb
30
musculature of body
22
embryo
20
lung
17
blood
17
bodily fluid
17
nerve
16
skeleton
12
spleen
5
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
12
AMP
Genome assembly (visualization)
3
GRCh38
1
hg19
Lab
12
AMP-T2D consortium
target.investigated_as!
histone modification
transcription factor
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
12 results
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ChIP-seq
WGBS
ATAC-seq
pCHi-C
tissue
spleen
8
2
1
1
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