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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
Assay category
8
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
8
control
6
histone
histone modification
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
6
November, 2018
4
December, 2018
1
January, 2019
1
October, 2017
Available data
12
bam
12
fastq
4
bigWig
2
bed bedMethyl
2
bed narrowPeak
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
tsv
Organism
12
Homo sapiens
Biosample type
12
tissue
Organ
359
pancreas
290
kidney
266
epithelium
176
liver
111
heart
101
bone element
88
connective tissue
88
vasculature
84
blood vessel
70
brain
66
limb
58
artery
54
musculature of body
52
eye
41
adipose tissue
19
lung
18
ureter
17
blood
17
bodily fluid
16
skeleton
14
nerve
12
spleen
8
embryo
7
vein
1
bone marrow
1
pericardium
1
pituitary gland
1
skin of body
1
thymus
Project
12
AMP
Genome assembly (visualization)
4
GRCh38
2
hg19
Lab
12
AMP-T2D consortium
target.investigated_as!
histone modification
transcription factor
files.file_type!
tsv
BIOSAMPLE
ASSAY
12 results
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Clear Filters
ChIP-seq
WGBS
ATAC-seq
DNase-seq
tissue
spleen
8
2
1
1
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