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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
27
snATAC-seq
18
single cell RNA-seq
6
WGBS
4
ATAC-seq
snDrop-seq
1
pCHi-C
Assay category
31
DNA accessibility
18
Transcription
6
DNA methylation
Date released
268
August, 2021
205
February, 2023
176
May, 2022
140
February, 2021
100
May, 2021
93
August, 2017
59
September, 2020
58
May, 2020
48
March, 2020
47
September, 2023
41
October, 2019
26
July, 2019
25
February, 2020
25
May, 2024
19
April, 2020
16
January, 2021
15
May, 2023
10
November, 2020
8
January, 2018
7
August, 2020
7
October, 2017
5
December, 2019
5
March, 2023
5
November, 2017
4
July, 2018
4
March, 2019
4
October, 2022
2
November, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
September, 2018
Available data
bam
556
tsv
551
bigWig
89
txt
45
fastq
23
bed narrowPeak
8
tagAlign
6
csv
4
bed bedgraph
2
bed bed3
2
bed bed3+
Organism
140
Homo sapiens
Biosample type
90
tissue
45
primary cell
4
in vitro differentiated cells
1
cell line
Organ
84
bone element
6
epithelium
6
pancreas
5
kidney
4
connective tissue
2
liver
Project
95
AMP
45
HPAP
Genome assembly (visualization)
5
hg19
Lab
95
AMP-T2D consortium
45
Klaus Kaestner, Upenn
Audit category:
84
inconsistent ontology term
32
audit script error
target.investigated_as!
narrow histone mark
assay_title!
snDrop-seq
files.file_type!
bam
BIOSAMPLE
ASSAY
140 results
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Clear Filters
RNA microarray
snATAC-seq
single cell RNA-seq
WGBS
ATAC-seq
pCHi-C
tissue
bone element
84
kidney
5
liver
1
primary cell
Langerhans cell
27
12
pancreatic alpha cell
6
in vitro differentiated cells
adipocyte
4
cell line
HepG2
1
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