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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
2
WGBS
1
ATAC-seq
1
pCHi-C
Assay category
18
DNA binding
2
DNA methylation
1
DNA accessibility
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
narrow histone mark
Date released
8
November, 2018
7
December, 2018
5
January, 2019
1
March, 2020
1
October, 2017
Available data
22
bam
22
fastq
14
bigWig
12
bed narrowPeak
11
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
bigBed broadPeak
1
tsv
Organism
22
Homo sapiens
Biosample type
22
tissue
Organ
866
pancreas
673
liver
642
connective tissue
477
adipose tissue
455
epithelium
323
heart
261
kidney
195
vasculature
193
blood vessel
159
bone element
134
brain
131
artery
71
limb
68
blood
68
bodily fluid
54
eye
50
musculature of body
33
nerve
29
embryo
22
spleen
20
lung
16
skeleton
12
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
22
AMP
Genome assembly (visualization)
13
GRCh38
11
hg19
Lab
22
AMP-T2D consortium
target.investigated_as!
narrow histone mark
assay_title!
whole genome sequencing assay
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
22 results
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ChIP-seq
WGBS
ATAC-seq
pCHi-C
tissue
spleen
18
2
1
1
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