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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
128
ATAC-seq
93
total RNA-seq
91
ChIP-seq
11
single cell RNA-seq
10
MeRIP-seq
6
snATAC-seq
5
STARR-seq
4
Hi-C
2
Capture-C
1
whole genome sequencing assay
Assay category
93
Transcription
Date released
59
August, 2021
26
May, 2022
8
May, 2021
Available data
55
txt
10
tsv
6
bam
6
fastq
2
bed bed3+
2
bigWig
Organism
93
Homo sapiens
Biosample type
77
tissue
9
cell line
5
in vitro differentiated cells
2
primary cell
Organ
49
kidney
29
liver
8
pancreas
Project
101
T1D
93
AMP
92
HPAP
Genome assembly (visualization)
2
hg19
Lab
AMP-T2D consortium
49
Katalin Susztak, Upenn
20
Karen Mohlke, UNC
14
Kyle Gaulton, UCSD
10
Bing Ren, UCSD
target.investigated_as!
narrow histone mark
lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
93 results
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Clear Filters
total RNA-seq
tissue
kidney
49
liver
20
islet of Langerhans
7
pancreas
1
cell line
HepG2
9
in vitro differentiated cells
embryonic stem cell
5
primary cell
CD8-positive, alpha-beta T cell
2
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