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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
396
total RNA-seq
ChIP-seq
6
ATAC-seq
3
small RNA-seq
2
DNase-seq
Assay category
399
Transcription
8
DNA accessibility
Date released
386
February, 2021
12
July, 2019
1
August, 2017
1
February, 2023
1
January, 2018
1
June, 2019
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
1
October, 2019
Available data
404
bigWig
403
bam
398
tsv
6
bed narrowPeak
4
bigBed narrowPeak
3
fastq
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
407
Homo sapiens
Biosample type
405
tissue
2
primary cell
Organ
513
connective tissue
495
pancreas
407
adipose tissue
210
epithelium
196
liver
114
heart
90
kidney
86
vasculature
83
blood vessel
70
bone element
68
artery
48
limb
46
musculature of body
41
brain
32
eye
18
ureter
14
embryo
12
skeleton
7
nerve
5
vein
2
pericardium
2
spleen
1
blood
1
bodily fluid
Project
407
AMP
Genome assembly (visualization)
407
hg19
406
GRCh38
Lab
407
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
target.investigated_as!
narrow histone mark
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
407 results
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total RNA-seq
ATAC-seq
small RNA-seq
DNase-seq
tissue
adipose tissue
382
3
omental fat pad
4
1
1
2
subcutaneous adipose tissue
6
1
1
visceral abdominal adipose tissue
3
adipose tissue(adipose white tissue)
1
primary cell
mesenchymal stem cell of adipose
1
1
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