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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
67
ChIP-seq
23
ATAC-seq
Assay category
67
DNA binding
23
DNA accessibility
Target of assay
114
histone
114
histone modification
64
broad histone mark
narrow histone mark
3
control
Date released
72
May, 2021
18
May, 2022
Available data
82
bed narrowPeak
72
bigWig
62
bam
44
tagAlign
18
fastq
Organism
90
Homo sapiens
Biosample type
67
primary cell
18
tissue
5
in vitro differentiated cells
Organ
18
pancreas
Project
46
AMP
44
T1D
Genome assembly (visualization)
90
hg19
44
GRCh38
Lab
1379
AMP-T2D consortium
90
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
15
Bing Ren, UCSD
7
Struan F.A. Grant, CHOP
3
Klaus Kaestner, Upenn
1
Katalin Susztak, Upenn
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
target.investigated_as!
narrow histone mark
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
90 results
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ChIP-seq
ATAC-seq
primary cell
monocyte
44
CD8-positive, alpha-beta T cell
23
tissue
islet of Langerhans
18
in vitro differentiated cells
embryonic stem cell
5
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