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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
2
Hi-C
1
ATAC-seq
Assay category
12
DNA binding
2
3D chromatin structure
1
DNA accessibility
Target of assay
11
transcription factor
3
histone
3
histone modification
narrow histone mark
1
RNA binding protein
1
broad histone mark
Date released
13
August, 2021
2
March, 2019
Available data
12
bed narrowPeak
12
bigWig
2
hic
1
bedpe
1
bedpe bed3+
Organism
15
Homo sapiens
Biosample type
13
cell line
2
tissue
Organ
13
liver
2
pancreas
Project
15
AMP
Genome assembly (visualization)
15
hg19
1
GRCh38
Lab
2566
AMP-T2D consortium
188
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
15
Bing Ren, UCSD
7
Struan F.A. Grant, CHOP
3
Klaus Kaestner, Upenn
1
Katalin Susztak, Upenn
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
15 results
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ChIP-seq
Hi-C
ATAC-seq
cell line
HepG2
12
1
tissue
islet of Langerhans
1
1
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