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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
ChIP-seq
Assay category
54
DNA binding
Target of assay
54
histone
54
histone modification
narrow histone mark
29
transcription factor
25
broad histone mark
1
RNA binding protein
1
recombinant protein
Date released
28
August, 2017
17
September, 2018
5
November, 2017
3
October, 2017
1
November, 2018
Available data
54
fastq
53
bam
52
bigWig
24
bed narrowPeak
11
bed bed3+
7
bigBed narrowPeak
3
tagAlign
1
bed broadPeak
Organism
54
Homo sapiens
Biosample type
22
tissue
21
primary cell
6
cell line
5
in vitro differentiated cells
Organ
28
pancreas
17
connective tissue
12
adipose tissue
10
epithelium
6
liver
3
brain
Project
54
AMP
Genome assembly (visualization)
52
hg19
47
GRCh38
Lab
54
AMP-T2D consortium
Audit category:
54
missing controlled_by
Audit category:
inconsistent control run_type
5
inconsistent control read length
target.investigated_as!
narrow histone mark
audit.WARNING.category!
inconsistent control run_type
BIOSAMPLE
ASSAY
54 results
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Clear Filters
ChIP-seq
tissue
white adipose tissue
12
islet of Langerhans
7
brain
3
primary cell
pancreatic endocrine cell
11
pancreatic ductal cell
6
pancreatic acinar cell
4
cell line
HepG2
6
in vitro differentiated cells
adipocyte
5
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