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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
82
ChIP-seq
3
ATAC-seq
3
DNase-seq
1
RRBS
Assay category
82
DNA binding
6
DNA accessibility
1
DNA methylation
Target of assay
75
histone
75
histone modification
narrow histone mark
36
broad histone mark
24
transcription factor
21
control
6
RNA binding protein
3
chromatin remodeller
Date released
314
November, 2017
May, 2021
170
February, 2021
148
May, 2020
134
May, 2022
110
February, 2023
89
August, 2017
79
August, 2021
62
November, 2018
60
October, 2019
59
September, 2020
58
September, 2018
48
July, 2018
44
June, 2019
43
April, 2018
32
December, 2017
31
February, 2018
31
July, 2019
28
December, 2018
23
March, 2020
22
January, 2019
17
November, 2019
12
November, 2020
8
January, 2021
7
August, 2020
7
December, 2019
6
January, 2018
5
March, 2023
5
September, 2017
4
August, 2018
4
May, 2019
4
October, 2022
3
June, 2018
2
October, 2018
Available data
78
bam
78
fastq
60
bigWig
50
bed narrowPeak
17
tagAlign
14
bigBed narrowPeak
10
bed broadPeak
10
bigBed broadPeak
7
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
Organism
89
Homo sapiens
Biosample type
tissue
52
in vitro differentiated cells
37
primary cell
Organ
52
connective tissue
25
pancreas
21
epithelium
Project
89
AMP
Genome assembly (visualization)
62
hg19
57
GRCh38
Lab
89
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
target.investigated_as!
narrow histone mark
biosample_type!
tissue
month_released!
May, 2021
BIOSAMPLE
ASSAY
89 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
RRBS
in vitro differentiated cells
adipocyte
51
1
primary cell
skeletal muscle myoblast
9
2
1
pancreatic alpha cell
9
1
pancreatic beta cell
9
1
pancreatic endocrine cell
4
pancreatic acinar cell
1
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