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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
18
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
narrow histone mark
Date released
9
November, 2018
7
December, 2018
5
January, 2019
1
March, 2020
1
October, 2017
Available data
22
bam
22
fastq
14
bigWig
12
bed narrowPeak
11
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
23
Homo sapiens
Biosample type
23
tissue
Organ
872
pancreas
730
liver
649
connective tissue
477
adipose tissue
475
epithelium
350
heart
339
kidney
207
vasculature
202
blood vessel
159
bone element
157
brain
133
artery
104
limb
81
musculature of body
68
blood
68
bodily fluid
57
eye
34
nerve
29
embryo
23
spleen
20
lung
18
ureter
16
skeleton
16
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
23
AMP
Genome assembly (visualization)
14
GRCh38
12
hg19
Lab
23
AMP-T2D consortium
target.investigated_as!
narrow histone mark
month_released!
February, 2020
BIOSAMPLE
ASSAY
23 results
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ChIP-seq
WGBS
ATAC-seq
DNase-seq
pCHi-C
tissue
spleen
18
2
1
1
1
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