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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ChIP-seq
30
DNase-seq
Assay category
42
DNA binding
30
DNA accessibility
Target of assay
56
histone
56
histone modification
34
broad histone mark
narrow histone mark
8
transcription factor
6
RNA binding protein
Date released
32
April, 2019
31
June, 2019
9
May, 2019
Available data
187
bam
184
bigWig
168
tsv
151
bed narrowPeak
72
bigBed narrowPeak
30
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
8
bed bedMethyl
8
bigBed bedMethyl
6
tagAlign
3
bedpe bed3+
3
hic
Organism
72
Homo sapiens
Biosample type
68
tissue
4
primary cell
Organ
344
liver
94
brain
94
kidney
72
heart
70
limb
61
epithelium
58
vasculature
55
blood vessel
53
blood
53
bodily fluid
43
pancreas
41
musculature of body
19
artery
18
connective tissue
18
nerve
18
ureter
11
spleen
8
vein
5
eye
4
adipose tissue
Project
72
AMP
Genome assembly (visualization)
72
GRCh38
69
hg19
Lab
72
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
target.investigated_as!
narrow histone mark
month_released!
October, 2018
BIOSAMPLE
ASSAY
72 results
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ChIP-seq
DNase-seq
tissue
heart
5
18
heart left ventricle
20
3
heart right ventricle
7
1
right atrium auricular region
5
2
coronary artery
1
2
+ See 2 more…
primary cell
cardiac fibroblast
1
3
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