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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
ChIP-seq
Assay category
43
DNA binding
Target of assay
35
transcription factor
22
histone
22
histone modification
narrow histone mark
8
broad histone mark
6
chromatin remodeller
3
RNA binding protein
1
recombinant protein
Date released
28
August, 2017
September, 2018
9
November, 2017
3
November, 2018
3
October, 2017
Available data
43
fastq
42
bam
41
bigWig
13
bed narrowPeak
13
bigBed narrowPeak
11
bed bed3+
3
tagAlign
1
bed broadPeak
Organism
43
Homo sapiens
Biosample type
22
tissue
12
cell line
5
in vitro differentiated cells
4
primary cell
Organ
17
connective tissue
12
adipose tissue
12
liver
11
pancreas
3
brain
Project
43
AMP
Genome assembly (visualization)
41
hg19
34
GRCh38
Lab
43
AMP-T2D consortium
Audit category:
43
missing controlled_by
Audit category:
6
inconsistent control run_type
5
inconsistent control read length
target.investigated_as!
narrow histone mark
month_released!
September, 2018
BIOSAMPLE
ASSAY
43 results
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Clear Filters
ChIP-seq
tissue
white adipose tissue
12
islet of Langerhans
7
brain
3
cell line
HepG2
12
in vitro differentiated cells
adipocyte
5
primary cell
pancreatic endocrine cell
4
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