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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
15
total RNA-seq
3
Hi-C
1
MPRA
Assay category
16
DNA binding
15
Transcription
3
3D chromatin structure
Target of assay
16
histone
16
histone modification
8
broad histone mark
8
control
narrow histone mark
Date released
715
February, 2021
368
November, 2017
335
May, 2021
323
August, 2017
314
May, 2020
308
August, 2021
207
June, 2019
205
February, 2023
200
May, 2022
173
October, 2019
168
July, 2018
108
July, 2019
88
November, 2018
86
May, 2019
78
December, 2017
65
October, 2018
61
March, 2020
59
September, 2020
58
September, 2018
57
April, 2019
57
November, 2019
49
April, 2018
47
September, 2023
35
December, 2018
31
February, 2018
27
January, 2019
25
February, 2020
21
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
31
bam
31
fastq
23
bigWig
15
tsv
8
bed narrowPeak
3
bedpe bed3+
3
cool
3
hic
1
txt
Organism
34
Homo sapiens
Biosample type
31
in vitro differentiated cells
3
primary cell
1
cell line
Organ
10
embryo
3
epithelium
3
pancreas
Project
32
AMP
3
HPAP
Genome assembly (visualization)
26
hg19
23
GRCh38
Lab
32
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
3
audit script error
Audit category:
1
inconsistent control read length
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
35 results
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Clear Filters
ChIP-seq
total RNA-seq
Hi-C
MPRA
in vitro differentiated cells
pancreatic endoderm
6
4
definitive endodermal cell
2
2
embryonic stem cell
2
2
endocrine cell
2
2
posterior foregut
2
2
+ See 2 more…
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
cell line
MIN6
1
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